Note
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Falling soft spheres in 2D
We consider falling soft spheres, associated to the power cost
where the parameter \(p\) tunes the deformability.
With \(p=0.75\), particles can deform easily and end up having elongated columnar shapes.
With \(p=2\), particles are less deformable and end up in a typical Voronoi-like configuration.
With \(p=10\), particles behave as hard-spheres.
Next, we consider two types of spheres: blues particles associated to \(p=2\) and orange particles associated to \(p=1\). We vary the strength \(\tau_o\) of the incompressibility force for the orange spheres, keeping the ones for the blue spheres \(\tau_b\) constant. This strength may be interpreted as an inertia parameter (typically the inverse of a mass). We observe a sorting phenomenon which tends to push the lighter particles on top.
With \(\tau_o=8\) and \(\tau_b=3\)
With \(\tau_o=3\) and \(\tau_b=3\)
With \(\tau_o=1\) and \(\tau_b=3\)
# sphinx_gallery_thumbnail_path = '_static/FallingSpheres_softheavy.png'
import os
import sys
sys.path.append("..")
import pickle
import torch
import numpy as np
from matplotlib import colors
from matplotlib.colors import ListedColormap
from iceshot import cells
from iceshot import costs
from iceshot import OT
from iceshot.OT import OT_solver
from iceshot import plot_cells
from iceshot import sample
from iceshot import utils
use_cuda = torch.cuda.is_available()
if use_cuda:
torch.set_default_tensor_type("torch.cuda.FloatTensor")
device = "cuda"
# ot_algo = OT.sinkhorn_zerolast
ot_algo = OT.LBFGSB
p_b = 10
tau_b = 1.5
p_o = 1
tau_o = 3
# simu_name = "simu_FallingSpheres" + "_p" + str(p_o) + "_tau" + str(tau_o)
simu_name = "simu_FallingSpheres" + "_p" + str(p_b) + "_b"
os.mkdir(simu_name)
os.mkdir(simu_name+"/frames")
os.mkdir(simu_name+"/data")
N = 30
# N = 42
# N1 = 21
N1 = N
N2 = N - N1
M = 512
# M = 300
cmap = utils.cmap_from_list(N1,N2,0,color_names=["tab:blue","tab:orange","tab:gray"])
seeds = torch.rand((N,2))
source = sample.sample_grid(M)
# vol_x = 0.5*torch.ones(N)/N
vol_x = 0.3*torch.ones(N)/N
simu = cells.Cells(
seeds=seeds,source=source,
vol_x=vol_x,extra_space="void"
)
p = torch.ones(N)
p[:N1] = p_b
p[N1:] = p_o
p0 = 6
cost_params = {
"p" : p0,
"scaling" : "volume",
"R" : simu.R_mean,
"C" : 1.0/(p0+2)
}
solver = OT_solver(
n_sinkhorn=300,n_sinkhorn_last=3000,n_lloyds=14,
cost_function=costs.power_cost,cost_params=cost_params
)
T = 10.0
dt = 0.001
plot_every = 5
t = 0.0
t_iter = 0
t_plot = 0
F = torch.tensor([[0.0,-0.4]])
# F = torch.tensor([[0.0,-0.25]])
tau = torch.ones(N)/simu.R_mean
tau[:N1] *= tau_b
# tau[:N1] *= 1.0
tau[N1:] *= tau_o
# cap = 2**(p0-1)
cap = None
#======================= INITIALISE ========================#
solver.solve(simu,
sinkhorn_algo=ot_algo,cap=cap,
tau=1.0,
to_bary=True,
show_progress=False)
simu_plot = plot_cells.CellPlot(simu,figsize=8,cmap=cmap,
plot_pixels=True,plot_scat=True,plot_quiv=False,plot_boundary=True,
scat_size=15,scat_color='k',
r=None,K=5,boundary_color='k',
plot_type="imshow",void_color='w')
simu_plot.fig.savefig(simu_name + "/frames/" + f"t_{t_plot}.png")
with open(simu_name + "/data/" + f"data_{t_plot}.pkl",'wb') as file:
pickle.dump(simu,file)
t += dt
t_iter += 1
t_plot += 1
solver.n_lloyds = 1
solver.cost_params["p"] = p
with open(simu_name + f"/params.pkl",'wb') as file:
pickle.dump(solver,file)
#=========================== RUN ===========================#
while t<T:
print("--------------------------",flush=True)
print(f"t={t}",flush=True)
print("--------------------------",flush=True)
plotting_time = t_iter%plot_every==0
if plotting_time:
print("I plot.",flush=True)
solver.n_sinkhorn_last = 3000
solver.n_sinkhorn = 3000
solver.s0 = 2.0
else:
print("I do not plot.",flush=True)
solver.n_sinkhorn_last = 400
solver.n_sinkhorn = 400
solver.s0 = 2.3*simu.R_mean
F_inc = solver.lloyd_step(simu,
sinkhorn_algo=ot_algo,cap=cap,
tau=tau,
to_bary=False,
show_progress=False,
default_init=False)
simu.x += F*dt + F_inc*dt
print(torch.max(torch.norm(F_inc,dim=1)))
if plotting_time:
simu_plot.update_plot(simu)
simu_plot.fig.savefig(simu_name + "/frames/" + f"t_{t_plot}.png")
with open(simu_name + "/data/" + f"data_{t_plot}.pkl",'wb') as file:
pickle.dump(simu,file)
t_plot += 1
t += dt
t_iter += 1
utils.make_video(simu_name=simu_name,video_name=simu_name)